Human (GRCh38.p14)
Description

U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]

Gene Synonyms

C16ORF57, FLJ13154, HVSL1, MPN1

Location
About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 5247 variant alleles and maps to 284 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000219281.8USB1-2012248265aaENSP00000219281.3
 
Protein coding
CCDS10791Q9BQ65-1 NM_024598.4MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000423271.8USB1-2023051186aaENSP00000409792.3
 
Protein coding
CCDS55997Q9BQ65-3 -GENCODE basicTSL:2
ENST00000698445.1USB1-2182489228aaENSP00000513727.1
 
Protein coding
A0A8V8TM89 -GENCODE basic
ENST00000563149.2USB1-2072254163aaENSP00000454692.1
 
Protein coding
CCDS81990H3BN52 -GENCODE basicTSL:2
ENST00000561568.6USB1-2042227252aaENSP00000457322.2
 
Protein coding
H3BTT8 -GENCODE basicTSL:4
ENST00000698444.1USB1-2172117214aaENSP00000513726.1
 
Protein coding
CCDS81991H3BNM8 -GENCODE basicAPPRIS P1
ENST00000698510.1USB1-2211402170aaENSP00000513760.1
 
Protein coding
A0A8V8TNL4 -GENCODE basic
ENST00000539737.6USB1-2031212247aaENSP00000446143.2
 
Protein coding
CCDS55998Q9BQ65-2 -GENCODE basicTSL:2
ENST00000561743.5USB1-2051135214aaENSP00000454928.1
 
Protein coding
CCDS81991H3BNM8 -GENCODE basicAPPRIS P1TSL:3
ENST00000698447.1USB1-2202224131aaENSP00000513732.1
 
Nonsense mediated decay
A0A8V8TM93 --
ENST00000698446.1USB1-219221690aaENSP00000513728.1
 
Nonsense mediated decay
A0A8V8TLS7 --
ENST00000565662.6USB1-2112168162aaENSP00000513729.1
 
Nonsense mediated decay
A0A8V8TLQ0 -TSL:4
ENST00000569252.5USB1-21557390aaENSP00000513730.1
 
Nonsense mediated decay
A0A8V8TLS7 -TSL:4
ENST00000562534.5USB1-20656250aaENSP00000513731.1
 
Nonsense mediated decay
A0A8V8TN78 -TSL:4
ENST00000564387.5USB1-20955895aaENSP00000457302.1
 
Nonsense mediated decay
H3BTS1 -TSL:4
ENST00000568848.5USB1-214548No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000563207.1USB1-208464No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000566082.1USB1-2123888No protein-
 
Retained intron
--TSL:2
ENST00000565151.1USB1-210886No protein-
 
Retained intron
--TSL:2
ENST00000566292.5USB1-213575No protein-
 
Retained intron
--TSL:2
ENST00000624720.1USB1-2162895No protein-
 
TEC
--TSL:NA
Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,051 bps, Translation length: 186 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ65

CCDS

This transcript is a member of the Human CCDS set: CCDS55997

Transcript Support Level (TSL)

TSL:2

Version

ENST00000423271.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.