Human (GRCh38.p14)
Description

VPS41 subunit of HOPS complex [Source:HGNC Symbol;Acc:HGNC:12713]

Gene Synonyms

HVSP41

Location
About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 44621 variant alleles and maps to 123 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000310301.9VPS41-2025854854aaENSP00000309457.4
 
Protein coding
CCDS5457P49754-1 NM_014396.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000395969.6VPS41-2033181829aaENSP00000379297.2
 
Protein coding
CCDS5458P49754-3 -GENCODE basicTSL:5
ENST00000413141.5VPS41-204575156aaENSP00000412974.1
 
Protein coding
C9JU58 -TSL:4CDS 3' incomplete
ENST00000414632.5VPS41-205548177aaENSP00000411919.1
 
Protein coding
C9J3F8 -TSL:4CDS 3' incomplete
ENST00000418457.6VPS41-206532104aaENSP00000407835.2
 
Protein coding
C9JZ11 -TSL:5CDS 3' incomplete
ENST00000457055.1VPS41-20946573aaENSP00000398584.1
 
Protein coding
C9J2U9 -TSL:4CDS 3' incomplete
ENST00000439468.1VPS41-207354109aaENSP00000395410.1
 
Protein coding
H7C0K2 -TSL:5CDS 5' incomplete
ENST00000265745.13VPS41-201769209aaENSP00000265745.9
 
Nonsense mediated decay
H7BXH3 -TSL:2
ENST00000448833.5VPS41-208711150aaENSP00000391980.1
 
Nonsense mediated decay
H7BZX6 -TSL:1CDS 5' incomplete
ENST00000466017.1VPS41-211591No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000485955.1VPS41-213571No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000482217.1VPS41-212951No protein-
 
Retained intron
--TSL:5
ENST00000490924.1VPS41-214496No protein-
 
Retained intron
--TSL:2
ENST00000462429.1VPS41-210347No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 5, Transcript length: 532 bps, Translation length: 104 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 3' incomplete

Version

ENST00000418457.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.