Transcript: ENST00000401018.5 LINC01356-201

Description

long intergenic non-protein coding RNA 1356 [Source:HGNC Symbol;Acc:HGNC:50587]

Gene Synonyms

LIMP27

Location

Chromosome 1: 112,820,174-112,850,643 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 14667 variant alleles and maps to 358 oligo probes.

Gene

This transcript is a product of gene ENSG00000215866.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000401018.5	LINC01356-201	1819	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000661136.1	LINC01356-204	1430	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000667852.1	LINC01356-205	1222	No protein	-	lncRNA	-	-
ENST00000433505.5	LINC01356-202	767	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000449572.2	LINC01356-203	702	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000691250.1	LINC01356-206	700	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,819 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000401018.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000401018.5 LINC01356-201

Summary

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Transcript: ENST00000401018.5 LINC01356-201

Summary

About Us

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