Human (GRCh38.p14)
Description

regulation of nuclear pre-mRNA domain containing 1A [Source:HGNC Symbol;Acc:HGNC:25560]

Gene Synonyms

FLJ10656, HST3101, P15RS

Location
About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 35203 variant alleles and maps to 548 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000399022.9RPRD1A-2024421312aaENSP00000381984.3
 
Protein coding
CCDS11917Q96P16-1 NM_018170.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000585953.5RPRD1A-2042357123aaENSP00000467268.1
 
Protein coding
K7EP82 -TSL:3CDS 5' incomplete
ENST00000590898.5RPRD1A-2091945276aaENSP00000467991.1
 
Protein coding
CCDS77178Q96P16-3 -GENCODE basicTSL:1
ENST00000357384.8RPRD1A-2011850312aaENSP00000349955.4
 
Protein coding
CCDS11917Q96P16-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000588737.5RPRD1A-2071264276aaENSP00000465444.1
 
Protein coding
CCDS77178Q96P16-3 -GENCODE basicTSL:2
ENST00000589050.1RPRD1A-2081022289aaENSP00000468209.1
 
Non stop decay
A0A0C4DGQ6 -TSL:1
ENST00000587563.5RPRD1A-20564349aaENSP00000468108.1
 
Nonsense mediated decay
K7ER50 -TSL:3CDS 5' incomplete
ENST00000592674.1RPRD1A-21156673aaENSP00000467949.1
 
Nonsense mediated decay
K7EQR8 -TSL:4
ENST00000585879.1RPRD1A-2034254aaENSP00000468173.1
 
Nonsense mediated decay
--TSL:3CDS 5' incomplete
ENST00000588459.1RPRD1A-206576No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000591994.1RPRD1A-2102484No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,421 bps, Translation length: 312 residues

MANE

This MANE Select transcript contains ENSP00000381984 and matches to NM_018170.5 and NP_060640.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96P16

CCDS

This transcript is a member of the Human CCDS set: CCDS11917

Transcript Support Level (TSL)

TSL:1

Version

ENST00000399022.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.