Human (GRCh38.p14)
Description

tripartite motif containing 5 [Source:HGNC Symbol;Acc:HGNC:16276]

Gene Synonyms

RNF88, TRIM5ALPHA

Location
About this transcript

This transcript has 8 exons, is annotated with 29 domains and features, is associated with 11066 variant alleles and maps to 503 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000380034.8TRIM5-2023364493aaENSP00000369373.3
 
Protein coding
CCDS31393Q9C035-1 NM_033034.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000396847.7TRIM5-2033170347aaENSP00000380058.3
 
Protein coding
CCDS31394Q9C035-3 -GENCODE basicTSL:1
ENST00000684655.1TRIM5-2142862493aaENSP00000507420.1
 
Protein coding
CCDS31393Q9C035-1 -GENCODE basicAPPRIS P1
ENST00000682968.1TRIM5-2122669265aaENSP00000506742.1
 
Protein coding
CCDS91425A0A804HHS7 -GENCODE basic
ENST00000380027.5TRIM5-2012290326aaENSP00000369366.1
 
Protein coding
CCDS31392Q9C035-4 -GENCODE basicTSL:5
ENST00000412903.1TRIM5-2041054209aaENSP00000388031.1
 
Protein coding
E7EQQ5 -TSL:1CDS 3' incomplete
ENST00000438025.5TRIM5-207767187aaENSP00000398196.1
 
Protein coding
H7C134 -TSL:3CDS 5' incomplete
ENST00000419850.1TRIM5-20560772aaENSP00000388150.1
 
Protein coding
C9JWN8 -TSL:4CDS 3' incomplete
ENST00000433961.5TRIM5-2062759271aaENSP00000393052.1
 
Nonsense mediated decay
Q9C035-5 -TSL:2
ENST00000483835.5TRIM5-209918No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000492086.5TRIM5-211662No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000465634.5TRIM5-208602No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000684417.1TRIM5-2131317No protein-
 
Retained intron
---
ENST00000487241.1TRIM5-210756No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 8, Coding exons: 7, Transcript length: 3,364 bps, Translation length: 493 residues

MANE

This MANE Select transcript contains ENSP00000369373 and matches to NM_033034.3 and NP_149023.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9C035

CCDS

This transcript is a member of the Human CCDS set: CCDS31393

Transcript Support Level (TSL)

TSL:2

Version

ENST00000380034.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.