Human (GRCh38.p14)
Description

shroom family member 1 [Source:HGNC Symbol;Acc:HGNC:24084]

Gene Synonyms

APXL2, KIAA1960

About this transcript

This transcript has 10 exons, is annotated with 29 domains and features, is associated with 4481 variant alleles and maps to 559 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000378679.8SHROOM1-2033768852aaENSP00000367950.3
 
Protein coding
CCDS54902Q2M3G4-1 NM_001172700.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000617339.4SHROOM1-2083638852aaENSP00000478436.1
 
Protein coding
CCDS54902Q2M3G4-1 -GENCODE basicAPPRIS P2TSL:5
ENST00000319854.7SHROOM1-2013190847aaENSP00000324245.3
 
Protein coding
CCDS4161Q2M3G4-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000378676.1SHROOM1-2022352783aaENSP00000367947.1
 
Protein coding
CCDS93780A6NN40 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000440118.1SHROOM1-2041080324aaENSP00000388049.1
 
Protein coding
C9JXU1 -TSL:2CDS 3' incomplete
ENST00000488072.1SHROOM1-205423No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000495680.2SHROOM1-206281No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000606676.1SHROOM1-207351No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 10, Coding exons: 7, Transcript length: 3,768 bps, Translation length: 852 residues

MANE

This MANE Select transcript contains ENSP00000367950 and matches to NM_001172700.2 and NP_001166171.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2M3G4

CCDS

This transcript is a member of the Human CCDS set: CCDS54902

Transcript Support Level (TSL)

TSL:1

Version

ENST00000378679.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.