Human (GRCh38.p14)
Description

reticulon 3 [Source:HGNC Symbol;Acc:HGNC:10469]

Gene Synonyms

ASYIP, HAP, NSPL2, NSPLII, RTN3-A1

Location
About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 36388 variant alleles and maps to 522 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000377819.10RTN3-20649171032aaENSP00000367050.5
 
Protein coding
CCDS58141O95197-1 NM_001265589.2MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000339997.8RTN3-20248861013aaENSP00000344106.4
 
Protein coding
CCDS8050O95197-2 -GENCODE basicTSL:1
ENST00000540798.5RTN3-2103124920aaENSP00000442733.1
 
Protein coding
CCDS58142O95197-7 -GENCODE basicTSL:1
ENST00000356000.7RTN3-2052645255aaENSP00000348279.3
 
Protein coding
CCDS41664O95197-4 -GENCODE basicTSL:2
ENST00000537981.5RTN3-2082532236aaENSP00000440874.1
 
Protein coding
CCDS8049O95197-3 -GENCODE basicAPPRIS P1TSL:1
ENST00000341307.6RTN3-2032524241aaENSP00000340903.2
 
Protein coding
CCDS8048O95197-5 -GENCODE basicTSL:2
ENST00000354497.4RTN3-2041407214aaENSP00000346492.4
 
Protein coding
CCDS58143O95197-6 -GENCODE basicTSL:2
ENST00000542238.5RTN3-211735185aaENSP00000437971.1
 
Protein coding
F5H617 -TSL:3CDS 3' incomplete
ENST00000545432.5RTN3-214545136aaENSP00000441614.1
 
Protein coding
F5GWG7 -TSL:4CDS 3' incomplete
ENST00000543552.5RTN3-213529130aaENSP00000442080.1
 
Protein coding
F5H891 -TSL:4CDS 3' incomplete
ENST00000536011.5RTN3-207992123aaENSP00000440960.1
 
Nonsense mediated decay
B7Z4M1 -TSL:2
ENST00000538995.1RTN3-209814No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000338850.5RTN3-201493No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000543123.1RTN3-212712No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,917 bps, Translation length: 1,032 residues

MANE

This MANE Select transcript contains ENSP00000367050 and matches to NM_001265589.2 and NP_001252518.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95197

CCDS

This transcript is a member of the Human CCDS set: CCDS58141

Transcript Support Level (TSL)

TSL:1

Version

ENST00000377819.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.