Transcript: ENST00000373306.5 TACR2-201

Description

tachykinin receptor 2 [Source:HGNC Symbol;Acc:HGNC:11527]

Gene Synonyms

NK2R, NKNAR, SKR, TAC2R

Location

Chromosome 10: 69,403,903-69,416,918 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 42 domains and features, is associated with 6659 variant alleles and maps to 389 oligo probes.

Gene

This transcript is a product of gene ENSG00000075073.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000373306.5	TACR2-201	2715	398aa	ENSP00000362403.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7293	P21452	NM_001057.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000373307.5	TACR2-202	1740	186aa	ENSP00000362404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NEW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,715 bps, Translation length: 398 residues

MANE

This MANE Select transcript contains ENSP00000362403 and matches to NM_001057.3 and NP_001048.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21452

CCDS

This transcript is a member of the Human CCDS set: CCDS7293

Transcript Support Level (TSL)

TSL:1

Version

ENST00000373306.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000373306.5 TACR2-201

Summary

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Transcript: ENST00000373306.5 TACR2-201

Summary

About Us

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