Human (GRCh38.p14)
Description

whirlin [Source:HGNC Symbol;Acc:HGNC:16361]

Gene Synonyms

CIP98, DFNB31, PDZD7B, USH2D

About this transcript

This transcript has 12 exons, is annotated with 42 domains and features, is associated with 45323 variant alleles and maps to 517 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000362057.4WHRN-2024070907aaENSP00000354623.3
 
Protein coding
CCDS6806Q9P202-1 NM_015404.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000265134.10WHRN-2012847524aaENSP00000265134.6
 
Protein coding
CCDS43870Q9P202-3 -GENCODE basicTSL:1
ENST00000674036.8WHRN-2072306565aaENSP00000501297.4
 
Protein coding
A0A669KBJ1 -CDS 5' incomplete
ENST00000699486.1WHRN-2101982479aaENSP00000514397.1
 
Protein coding
A0A8V8TQ31 -GENCODE basic
ENST00000699485.1WHRN-2091742355aaENSP00000514396.1
 
Protein coding
A0A8V8TNT0 -GENCODE basic
ENST00000374057.3WHRN-2031718345aaENSP00000363170.3
 
Protein coding
Q9P202-2 -GENCODE basicTSL:2
ENST00000673697.1WHRN-20559120aaENSP00000501152.1
 
Protein coding
A0A669KBA5 -CDS 3' incomplete
ENST00000480518.1WHRN-204305No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000674048.1WHRN-2083278No protein-
 
Retained intron
---
ENST00000673811.1WHRN-2062674No protein-
 
Retained intron
---
Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,070 bps, Translation length: 907 residues

MANE

This MANE Select transcript contains ENSP00000354623 and matches to NM_015404.4 and NP_056219.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P202

CCDS

This transcript is a member of the Human CCDS set: CCDS6806

Transcript Support Level (TSL)

TSL:1

Version

ENST00000362057.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.