Human (GRCh38.p14)
Description

RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923]

Gene Synonyms

CAPER, CAPERALPHA, CC1.3, FSAP59, HCC1, RNPC2

Location
About this transcript

This transcript has 17 exons, is annotated with 31 domains and features, is associated with 20737 variant alleles and maps to 918 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000253363.11RBM39-2015060530aaENSP00000253363.6
 
Protein coding
CCDS13266Q14498-1 NM_184234.3MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000361162.10RBM39-2032831524aaENSP00000354437.6
 
Protein coding
CCDS13265Q14498-2 -GENCODE basicAPPRIS P1TSL:1
ENST00000528062.7RBM39-2432421508aaENSP00000436747.2
 
Protein coding
CCDS56186Q14498-3 -GENCODE basicTSL:1
ENST00000374038.7RBM39-2041026231aaENSP00000363150.3
 
Protein coding
Q5QP23 -TSL:5CDS 3' incomplete
ENST00000448303.5RBM39-2171008336aaENSP00000394824.1
 
Protein coding
H0Y4X3 -TSL:5CDS 5' and 3' incomplete
ENST00000426951.5RBM39-21184086aaENSP00000405916.1
 
Protein coding
H0Y6I9 -TSL:1CDS 5' incomplete
ENST00000434927.5RBM39-214716193aaENSP00000393493.1
 
Protein coding
Q5QP22 -TSL:5CDS 3' incomplete
ENST00000397370.3RBM39-20561295aaENSP00000380527.3
 
Protein coding
A8MYG5 -GENCODE basicTSL:2
ENST00000656873.1RBM39-246313140aaENSP00000499479.1
 
Nonsense mediated decay
F2Z3E6 --
ENST00000403542.6RBM39-206288340aaENSP00000385977.2
 
Nonsense mediated decay
F2Z3E6 -TSL:2
ENST00000338163.10RBM39-2022792423aaENSP00000344581.6
 
Nonsense mediated decay
G3XAC6 -TSL:2
ENST00000429968.5RBM39-212214947aaENSP00000395124.1
 
Nonsense mediated decay
F2Z2Z5 -TSL:2
ENST00000444878.5RBM39-216212440aaENSP00000394602.1
 
Nonsense mediated decay
F2Z3E6 -TSL:2
ENST00000453310.5RBM39-219106840aaENSP00000397443.1
 
Nonsense mediated decay
F2Z3E6 -TSL:2
ENST00000412738.5RBM39-207101840aaENSP00000397917.1
 
Nonsense mediated decay
F2Z3E6 -TSL:3
ENST00000490484.7RBM39-236871245aaENSP00000489005.1
 
Nonsense mediated decay
A0A0U1RQH7 -TSL:5CDS 5' incomplete
ENST00000476806.5RBM39-23075459aaENSP00000483837.1
 
Nonsense mediated decay
A0A087X122 -TSL:5CDS 5' incomplete
ENST00000615771.5RBM39-244686163aaENSP00000489196.1
 
Nonsense mediated decay
A0A0U1RQW2 -TSL:5CDS 5' incomplete
ENST00000433027.5RBM39-21361139aaENSP00000407466.1
 
Nonsense mediated decay
F8WF24 -TSL:5
ENST00000416529.5RBM39-20959462aaENSP00000407150.1
 
Nonsense mediated decay
F8WF73 -TSL:3
ENST00000416108.5RBM39-20857740aaENSP00000406900.1
 
Nonsense mediated decay
F2Z3E6 -TSL:4
ENST00000425184.5RBM39-21052623aaENSP00000389459.1
 
Nonsense mediated decay
H7BZG3 -TSL:3CDS 5' incomplete
ENST00000455343.5RBM39-22044140aaENSP00000395563.1
 
Nonsense mediated decay
F2Z3E6 -TSL:5
ENST00000449489.5RBM39-21843240aaENSP00000390303.1
 
Nonsense mediated decay
F2Z3E6 -TSL:5
ENST00000665058.1RBM39-2471983No protein-
 
Protein coding CDS not defined
---
ENST00000463098.5RBM39-224869No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000494274.5RBM39-239704No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000442447.5RBM39-215644No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000498280.1RBM39-242444No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000470563.5RBM39-227384No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000487604.1RBM39-234370No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000639702.1RBM39-2455914No protein-
 
Retained intron
--TSL:5
ENST00000463004.5RBM39-2234580No protein-
 
Retained intron
--TSL:5
ENST00000461283.5RBM39-2212415No protein-
 
Retained intron
--TSL:5
ENST00000492779.5RBM39-2372316No protein-
 
Retained intron
--TSL:2
ENST00000482563.1RBM39-2331737No protein-
 
Retained intron
--TSL:2
ENST00000477334.1RBM39-231949No protein-
 
Retained intron
--TSL:2
ENST00000461849.1RBM39-222861No protein-
 
Retained intron
--TSL:2
ENST00000465158.5RBM39-225825No protein-
 
Retained intron
--TSL:2
ENST00000495293.5RBM39-240759No protein-
 
Retained intron
--TSL:2
ENST00000481037.5RBM39-232687No protein-
 
Retained intron
--TSL:3
ENST00000496183.5RBM39-241632No protein-
 
Retained intron
--TSL:2
ENST00000493853.1RBM39-238567No protein-
 
Retained intron
--TSL:4
ENST00000475651.5RBM39-229555No protein-
 
Retained intron
--TSL:5
ENST00000471635.5RBM39-228549No protein-
 
Retained intron
--TSL:2
ENST00000468086.1RBM39-226549No protein-
 
Retained intron
--TSL:4
ENST00000490354.5RBM39-235436No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,831 bps, Translation length: 524 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14498

CCDS

This transcript is a member of the Human CCDS set: CCDS13265

Transcript Support Level (TSL)

TSL:1

Version

ENST00000361162.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.