Human (GRCh38.p14)
Description

RAB5 interacting factor [Source:HGNC Symbol;Acc:HGNC:15870]

Gene Synonyms

C20ORF24, OPTI, PNAS-11, RCAF1, RIP5

Location
About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 4509 variant alleles and maps to 375 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000344795.8RAB5IF-2021069129aaENSP00000340164.3
 
Protein coding
CCDS13280Q9BUV8-2 NM_018840.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000373852.9RAB5IF-2031059137aaENSP00000362958.5
 
Protein coding
CCDS56190Q9BUV8-1 -GENCODE basicTSL:1
ENST00000342422.3RAB5IF-201896143aaENSP00000341213.3
 
Protein coding
CCDS13279Q9BUV8-5 -GENCODE basicTSL:2
ENST00000483815.5RAB5IF-204117087aaENSP00000432510.1
 
Nonsense mediated decay
Q9BUV8-4 -TSL:1
ENST00000492721.5RAB5IF-206104487aaENSP00000435871.1
 
Nonsense mediated decay
Q9BUV8-4 -TSL:2
ENST00000494506.1RAB5IF-207874No protein-
 
Retained intron
--TSL:2
ENST00000491113.1RAB5IF-205734No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 3, Coding exons: 3, Transcript length: 896 bps, Translation length: 143 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BUV8

CCDS

This transcript is a member of the Human CCDS set: CCDS13279

Transcript Support Level (TSL)

TSL:2

Version

ENST00000342422.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.