Human (GRCh38.p14)
Description

lin-54 DREAM MuvB core complex component [Source:HGNC Symbol;Acc:HGNC:25397]

Gene Synonyms

CXCDC1, DKFZP686L1814, JC8.6, MIP120, TCX1

Location
About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 34962 variant alleles and maps to 666 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000340417.8LIN54-2016121749aaENSP00000341947.3
 
Protein coding
CCDS3599Q6MZP7-1 NM_194282.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000442461.6LIN54-2024254528aaENSP00000398265.2
 
Protein coding
CCDS47089Q6MZP7-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000446851.6LIN54-2034083528aaENSP00000407139.2
 
Protein coding
CCDS47089Q6MZP7-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000506560.5LIN54-2062757660aaENSP00000423475.1
 
Protein coding
CCDS75157Q6MZP7-2 -GENCODE basicTSL:1
ENST00000505397.1LIN54-2042742749aaENSP00000425844.1
 
Protein coding
CCDS3599Q6MZP7-1 -GENCODE basicAPPRIS P4TSL:5
ENST00000510557.5LIN54-2092257528aaENSP00000421045.1
 
Protein coding
CCDS47089Q6MZP7-3 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000510877.5LIN54-210450762aaENSP00000421651.1
 
Nonsense mediated decay
D6REW4 -TSL:1
ENST00000508171.5LIN54-2072684243aaENSP00000427413.1
 
Nonsense mediated decay
Q6MZP7-5 -TSL:1
ENST00000505905.1LIN54-205810No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000509748.1LIN54-208729No protein-
 
Protein coding CDS not defined
--TSL:5
Statistics

Exons: 13, Coding exons: 12, Transcript length: 6,121 bps, Translation length: 749 residues

MANE

This MANE Select transcript contains ENSP00000341947 and matches to NM_194282.4 and NP_919258.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6MZP7

CCDS

This transcript is a member of the Human CCDS set: CCDS3599

Transcript Support Level (TSL)

TSL:1

Version

ENST00000340417.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.