Transcript: ENST00000326974.9 KLHDC3-202

Description

kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]

Gene Synonyms

DJ20C7.3, HPEAS, PEAS

Location

Chromosome 6: 43,014,249-43,021,294 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 3165 variant alleles and maps to 652 oligo probes.

Gene

This transcript is a product of gene ENSG00000124702.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000326974.9	KLHDC3-202	1869	382aa	ENSP00000313995.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4880	Q9BQ90	NM_057161.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000244670.12	KLHDC3-201	1903	248aa	ENSP00000244670.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W6A4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,869 bps, Translation length: 382 residues

MANE

This MANE Select transcript contains ENSP00000313995 and matches to NM_057161.4 and NP_476502.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ90

CCDS

This transcript is a member of the Human CCDS set: CCDS4880

Transcript Support Level (TSL)

TSL:1

Version

ENST00000326974.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000326974.9 KLHDC3-202

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Transcript: ENST00000326974.9 KLHDC3-202

Summary

About Us

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