Human (GRCh38.p14)
Description

CD44 molecule (Indian blood group) [Source:HGNC Symbol;Acc:HGNC:1681]

Gene Synonyms

CD44R, CDW44, CSPG8, ECM-III, H-CAM, HCELL, HERMES-1, HUTCH-1, HUTCH-I, IN, MC56, MDU2, MDU3, MIC4, PGP-1, PGP1

Location
About this transcript

This transcript has 9 exons, is annotated with 29 domains and features, is associated with 40545 variant alleles and maps to 912 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000428726.8CD44-2085431742aaENSP00000398632.2
 
Protein coding
CCDS7897P16070-1 NM_000610.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000263398.11CD44-2014288361aaENSP00000263398.6
 
Protein coding
CCDS31457P16070-12 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000415148.6CD44-2062369699aaENSP00000389830.2
 
Protein coding
CCDS31455P16070-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000433892.6CD44-2092292493aaENSP00000392331.2
 
Protein coding
CCDS31456P16070-10 -GENCODE basicAPPRIS P4TSL:1
ENST00000442151.6CD44-2111825294aaENSP00000398099.2
 
Protein coding
H0Y5E4 -TSL:1CDS 5' incomplete
ENST00000434472.6CD44-2101634429aaENSP00000404447.2
 
Protein coding
CCDS55754P16070-11 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000526025.2CD44-222102578aaENSP00000435377.1
 
Protein coding
E9PKC6 -GENCODE basicTSL:2
ENST00000352818.8CD44-2051023340aaENSP00000309732.6
 
Protein coding
CCDS55755P16070-18 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000525211.6CD44-214874277aaENSP00000432405.2
 
Protein coding
H0YCV9 -TSL:5CDS 3' incomplete
ENST00000526669.6CD44-224870206aaENSP00000432704.2
 
Protein coding
H0YD13 -GENCODE basicTSL:5
ENST00000279452.10CD44-204862287aaENSP00000279452.6
 
Protein coding
H0Y2P0 -TSL:3CDS 5' and 3' incomplete
ENST00000531110.6CD44-231806268aaENSP00000436549.2
 
Protein coding
H0YEU1 -TSL:3CDS 5' and 3' incomplete
ENST00000525685.6CD44-219729243aaENSP00000436623.2
 
Protein coding
H0YEV3 -TSL:3CDS 5' and 3' incomplete
ENST00000526000.6CD44-221721240aaENSP00000434465.2
 
Protein coding
H0YDW7 -TSL:5CDS 5' and 3' incomplete
ENST00000525469.1CD44-21870582aaENSP00000434920.1
 
Protein coding
H0YE40 -TSL:3CDS 5' incomplete
ENST00000278385.10CD44-202697232aaENSP00000278385.6
 
Protein coding
J3KN83 -TSL:3CDS 5' and 3' incomplete
ENST00000528455.5CD44-228687229aaENSP00000432718.1
 
Protein coding
H0YD17 -TSL:3CDS 5' and 3' incomplete
ENST00000528672.1CD44-229586195aaENSP00000431860.1
 
Protein coding
H0YCL4 -TSL:4CDS 5' and 3' incomplete
ENST00000531873.5CD44-234584195aaENSP00000433189.1
 
Protein coding
H0YD90 -TSL:3CDS 5' and 3' incomplete
ENST00000533222.5CD44-236581193aaENSP00000435321.1
 
Protein coding
H0YEA1 -TSL:2CDS 5' and 3' incomplete
ENST00000526553.6CD44-223571191aaENSP00000434418.2
 
Protein coding
H0YDV8 -TSL:4CDS 5' and 3' incomplete
ENST00000525688.5CD44-220560186aaENSP00000436980.1
 
Protein coding
H0YF08 -TSL:5CDS 5' and 3' incomplete
ENST00000527889.6CD44-226548183aaENSP00000434530.2
 
Protein coding
H0YDX6 -TSL:3CDS 5' and 3' incomplete
ENST00000278386.10CD44-203484139aaENSP00000278386.6
 
Protein coding
CCDS31458P16070-19 -GENCODE basicTSL:1
ENST00000524922.1CD44-212352118aaENSP00000436451.1
 
Protein coding
H0YES0 -TSL:3CDS 5' and 3' incomplete
ENST00000425428.6CD44-207176880aaENSP00000395953.2
 
Nonsense mediated decay
Q86UZ1 -TSL:1
ENST00000528922.1CD44-2301319No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000528086.5CD44-227580No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000525209.5CD44-213574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000531118.5CD44-232877No protein-
 
Retained intron
--TSL:2
ENST00000534296.5CD44-238863No protein-
 
Retained intron
--TSL:3
ENST00000527326.1CD44-225718No protein-
 
Retained intron
--TSL:2
ENST00000532339.1CD44-235589No protein-
 
Retained intron
--TSL:2
ENST00000525293.5CD44-216569No protein-
 
Retained intron
--TSL:3
ENST00000525348.1CD44-217568No protein-
 
Retained intron
--TSL:3
ENST00000534082.1CD44-237564No protein-
 
Retained intron
--TSL:2
ENST00000531141.1CD44-233537No protein-
 
Retained intron
--TSL:2
ENST00000525241.1CD44-215440No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,288 bps, Translation length: 361 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16070

CCDS

This transcript is a member of the Human CCDS set: CCDS31457

Transcript Support Level (TSL)

TSL:1

Version

ENST00000263398.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.