Human (GRCh38.p14)
Description

polycystin 1, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:9008]

Gene Synonyms

PBP, PC-1, TRPP1

Location
About this transcript

This transcript has 46 exons, is annotated with 167 domains and features, is associated with 39155 variant alleles and maps to 4641 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000262304.9PKD1-201141404303aaENSP00000262304.4
 
Protein coding
CCDS32369P98161-1 NM_001009944.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P5TSL:1
ENST00000423118.5PKD1-203141354302aaENSP00000399501.1
 
Protein coding
CCDS45385P98161-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000567946.1PKD1-2341822607aaENSP00000457984.1
 
Protein coding
H3BV77 -TSL:5CDS 5' and 3' incomplete
ENST00000488185.2PKD1-221737246aaENSP00000456672.1
 
Protein coding
H3BSE9 -TSL:5CDS 5' and 3' incomplete
ENST00000483024.1PKD1-214465155aaENSP00000456670.1
 
Protein coding
H3BSE8 -TSL:5CDS 5' and 3' incomplete
ENST00000487932.5PKD1-22064641122aaENSP00000457132.1
 
Nonsense mediated decay
H3BTE0 -TSL:5CDS 5' incomplete
ENST00000568591.5PKD1-2352545200aaENSP00000457162.1
 
Nonsense mediated decay
H3BTG3 -TSL:2CDS 5' incomplete
ENST00000561668.5PKD1-22366545aaENSP00000461391.1
 
Nonsense mediated decay
I3L4N0 -TSL:3CDS 5' incomplete
ENST00000562425.1PKD1-22660891aaENSP00000455753.1
 
Nonsense mediated decay
H3BQF4 -TSL:3CDS 5' incomplete
ENST00000561991.5PKD1-224964No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000473780.2PKD1-210667No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000570193.5PKD1-239596No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000483558.5PKD1-215577No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000570150.1PKD1-238571No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000566905.5PKD1-232559No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000475889.1PKD1-212511No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000566784.5PKD1-231493No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000468674.5PKD1-204490No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000564865.5PKD1-228480No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000486339.6PKD1-2194443No protein-
 
Retained intron
--TSL:5
ENST00000496574.6PKD1-2224419No protein-
 
Retained intron
--TSL:5
ENST00000483731.5PKD1-2164193No protein-
 
Retained intron
--TSL:5
ENST00000415938.7PKD1-2023386No protein-
 
Retained intron
--TSL:5
ENST00000471603.6PKD1-2072505No protein-
 
Retained intron
--TSL:5
ENST00000480227.5PKD1-2132353No protein-
 
Retained intron
--TSL:1
ENST00000562297.5PKD1-2252040No protein-
 
Retained intron
--TSL:5
ENST00000565639.6PKD1-2301976No protein-
 
Retained intron
--TSL:5
ENST00000472577.1PKD1-2081140No protein-
 
Retained intron
--TSL:2
ENST00000474088.1PKD1-211923No protein-
 
Retained intron
--TSL:5
ENST00000569983.5PKD1-237722No protein-
 
Retained intron
--TSL:5
ENST00000485120.1PKD1-218696No protein-
 
Retained intron
--TSL:3
ENST00000472659.1PKD1-209661No protein-
 
Retained intron
--TSL:3
ENST00000469851.1PKD1-206661No protein-
 
Retained intron
--TSL:5
ENST00000469241.2PKD1-205659No protein-
 
Retained intron
--TSL:2
ENST00000570253.5PKD1-240603No protein-
 
Retained intron
--TSL:5
ENST00000567355.1PKD1-233575No protein-
 
Retained intron
--TSL:4
ENST00000564890.1PKD1-229574No protein-
 
Retained intron
--TSL:5
ENST00000564313.1PKD1-227568No protein-
 
Retained intron
--TSL:4
ENST00000483814.1PKD1-217563No protein-
 
Retained intron
--TSL:2
ENST00000568796.1PKD1-236447No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 46, Coding exons: 46, Transcript length: 14,140 bps, Translation length: 4,303 residues

MANE

This MANE Select transcript contains ENSP00000262304 and matches to NM_001009944.3 and NP_001009944.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P98161

CCDS

This transcript is a member of the Human CCDS set: CCDS32369

Transcript Support Level (TSL)

TSL:1

Version

ENST00000262304.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.