Human (GRCh38.p14)
Description

SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]

Gene Synonyms

FLJ20356

Location
About this transcript

This transcript has 18 exons, is annotated with 32 domains and features, is associated with 24594 variant alleles and maps to 620 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000245105.8SH3TC1-20143031336aaENSP00000245105.3
 
Protein coding
CCDS3399Q8TE82 NM_018986.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:2
ENST00000457650.7SH3TC1-20343451336aaENSP00000390311.3
 
Protein coding
CCDS3399E7EQR1 Q8TE82 -GENCODE basicAPPRIS P2TSL:5
ENST00000508641.2SH3TC1-21639751260aaENSP00000426035.2
 
Protein coding
CCDS93476H0YA34 -GENCODE basicAPPRIS ALT2TSL:4
ENST00000684698.1SH3TC1-22839301309aaENSP00000506945.1
 
Protein coding
CCDS93475A0A804HI81 -GENCODE basic
ENST00000511002.6SH3TC1-2191142337aaENSP00000423583.2
 
Protein coding
H0Y9A4 -GENCODE basicTSL:5
ENST00000382521.7SH3TC1-202829113aaENSP00000371961.3
 
Protein coding
Q6NVH2 -GENCODE basicTSL:1
ENST00000512966.1SH3TC1-22151441aaENSP00000475411.1
 
Protein coding
U3KQ04 -TSL:4CDS 5' incomplete
ENST00000515682.5SH3TC1-224429376aaENSP00000425079.1
 
Nonsense mediated decay
D6REB6 -TSL:2
ENST00000682862.1SH3TC1-22642371084aaENSP00000507502.1
 
Nonsense mediated decay
A0A804HJH0 --
ENST00000684537.1SH3TC1-2274024587aaENSP00000507344.1
 
Nonsense mediated decay
A0A804HJ39 --
ENST00000682056.1SH3TC1-22539611046aaENSP00000507811.1
 
Nonsense mediated decay
A0A804HK80 --
ENST00000502669.5SH3TC1-2063484202aaENSP00000425970.1
 
Nonsense mediated decay
D6RI07 -TSL:1
ENST00000507891.2SH3TC1-2131021179aaENSP00000427316.2
 
Nonsense mediated decay
H0YAJ7 -TSL:5
ENST00000514274.1SH3TC1-223565No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000503284.5SH3TC1-207560No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000510763.5SH3TC1-218543No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000507801.1SH3TC1-212538No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000504822.1SH3TC1-209259No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000506360.5SH3TC1-2105829No protein-
 
Retained intron
--TSL:2
ENST00000502559.1SH3TC1-2053798No protein-
 
Retained intron
--TSL:2
ENST00000502350.5SH3TC1-2042258No protein-
 
Retained intron
--TSL:2
ENST00000508183.5SH3TC1-2141410No protein-
 
Retained intron
--TSL:1
ENST00000512100.5SH3TC1-220755No protein-
 
Retained intron
--TSL:3
ENST00000504223.1SH3TC1-208698No protein-
 
Retained intron
--TSL:3
ENST00000509553.1SH3TC1-217627No protein-
 
Retained intron
--TSL:4
ENST00000513495.5SH3TC1-222600No protein-
 
Retained intron
--TSL:4
ENST00000507123.1SH3TC1-211554No protein-
 
Retained intron
--TSL:1
ENST00000508438.1SH3TC1-215515No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 18, Coding exons: 17, Transcript length: 4,303 bps, Translation length: 1,336 residues

MANE

This MANE Select transcript contains ENSP00000245105 and matches to NM_018986.5 and NP_061859.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TE82

CCDS

This transcript is a member of the Human CCDS set: CCDS3399

Transcript Support Level (TSL)

TSL:2

Version

ENST00000245105.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.