Human (GRCh38.p14)
Description

cone-rod homeobox [Source:HGNC Symbol;Acc:HGNC:2383]

Gene Synonyms

CORD2, CRD, LCA7, OTX3

Location
About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 10916 variant alleles and maps to 472 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000221996.12CRX-2014366299aaENSP00000221996.5
 
Protein coding
CCDS12706O43186 NM_000554.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000613299.1CRX-206419341aaENSP00000478106.1
 
Protein coding
A0A087WTS9 -GENCODE basicTSL:3
ENST00000566686.5CRX-20343357aaENSP00000457808.2
 
Protein coding
H3BUU7 -TSL:5CDS 3' incomplete
ENST00000602001.1CRX-204643No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000556527.1CRX-202164No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000604324.1CRX-2051467No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 4, Coding exons: 3, Transcript length: 4,366 bps, Translation length: 299 residues

MANE

This MANE Select transcript contains ENSP00000221996 and matches to NM_000554.6 and NP_000545.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43186

CCDS

This transcript is a member of the Human CCDS set: CCDS12706

Transcript Support Level (TSL)

TSL:2

Version

ENST00000221996.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.