Human (GRCh38.p14)
Description

small glutamine rich tetratricopeptide repeat co-chaperone alpha [Source:HGNC Symbol;Acc:HGNC:10819]

Gene Synonyms

ALPHASGT, HSGT, SGT, SGT1, UBP, VPU

Location
About this transcript

This transcript has 12 exons, is annotated with 30 domains and features, is associated with 14945 variant alleles and maps to 429 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000221566.7SGTA-2012231313aaENSP00000221566.1
 
Protein coding
CCDS12094O43765 NM_003021.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000676943.1SGTA-2072854313aaENSP00000504495.1
 
Protein coding
CCDS12094O43765 -GENCODE basicAPPRIS P1
ENST00000677562.1SGTA-2112227360aaENSP00000504146.1
 
Protein coding
A0A7I2V588 -GENCODE basic
ENST00000677754.1SGTA-2132211295aaENSP00000504843.1
 
Protein coding
A0A7I2V5Z3 -GENCODE basic
ENST00000676984.1SGTA-2082128262aaENSP00000504741.1
 
Protein coding
A0A7I2V697 -GENCODE basic
ENST00000587866.1SGTA-20384168aaENSP00000468443.1
 
Protein coding
K7ERW5 -TSL:5CDS 3' incomplete
ENST00000589251.5SGTA-204637162aaENSP00000466461.1
 
Protein coding
K7EMD6 -TSL:3CDS 3' incomplete
ENST00000679138.1SGTA-2182393276aaENSP00000504149.1
 
Nonsense mediated decay
A0A7I2V4T9 --
ENST00000678109.1SGTA-214231651aaENSP00000504855.1
 
Nonsense mediated decay
A0A7I2YQY5 --
ENST00000678595.1SGTA-2162255287aaENSP00000503090.1
 
Nonsense mediated decay
A0A7I2V2U2 --
ENST00000677149.1SGTA-2091705313aaENSP00000503397.1
 
Nonsense mediated decay
CCDS12094O43765 --
ENST00000586711.1SGTA-202571No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000679132.1SGTA-2174097No protein-
 
Retained intron
---
ENST00000677731.1SGTA-2123744No protein-
 
Retained intron
---
ENST00000676611.1SGTA-2062851No protein-
 
Retained intron
---
ENST00000677513.1SGTA-2102589No protein-
 
Retained intron
---
ENST00000678577.1SGTA-2151708No protein-
 
Retained intron
---
ENST00000591984.1SGTA-205882No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,231 bps, Translation length: 313 residues

MANE

This MANE Select transcript contains ENSP00000221566 and matches to NM_003021.4 and NP_003012.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43765

CCDS

This transcript is a member of the Human CCDS set: CCDS12094

Transcript Support Level (TSL)

TSL:1

Version

ENST00000221566.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.