Transcript: ENSSSCT00000031590.4 CAPNS1-201

Description

calpain small subunit 1 [Source:NCBI gene (formerly Entrezgene);Acc:397587]

Gene Synonyms

CAPN4

Location

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 404 variant alleles and maps to 9 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000031590.4	CAPNS1-201	1489	274aa	ENSSSCP00000025968.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GT88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000104814.1	CAPNS1-203	1375	236aa	ENSSSCP00000076628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TE30 A0A8W4FCP9	-
ENSSSCT00000095232.1	CAPNS1-202	775	94aa	ENSSSCP00000075745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TFJ0 A0A8W4F8U9	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,489 bps, Translation length: 274 residues

Version

ENSSSCT00000031590.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.