Transcript: ENSSSCT00000030282.3 OTOG-201

Description

otogelin [Source:VGNC Symbol;Acc:VGNC:91090]

Location

About this transcript

This transcript has 54 exons, is annotated with 55 domains and features and is associated with 3788 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030282.3	OTOG-201	9891	2863aa	ENSSSCP00000024487.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LK73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000099446.1	OTOG-202	9792	2830aa	ENSSSCP00000077487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FF44	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 9,891 bps, Translation length: 2,863 residues

Version

ENSSSCT00000030282.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.