Transcript: ENSSSCT00000023727.4 VIT-203

Description

vitrin [Source:VGNC Symbol;Acc:VGNC:94830]

Location

Primary_assembly 3: 103,379,139-103,492,964 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 22 domains and features, is associated with 4402 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000008501.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000023727.4	VIT-203	2701	656aa	ENSSSCP00000023843.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HJ71 I3LID8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000088489.2	VIT-204	4152	631aa	ENSSSCP00000065372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R485 A0A8D1KY09	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000058017.3	VIT-202	3459	600aa	ENSSSCP00000047021.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ASF5	-
ENSSSCT00000072859.1	VIT-201	931	204aa	ENSSSCP00000064707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1T4N5 A0A5G2QJP7	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 2,701 bps, Translation length: 656 residues

Version

ENSSSCT00000023727.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSSSCT00000023727.4 VIT-203

Summary

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Transcript: ENSSSCT00000023727.4 VIT-203

Summary

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