Transcript: ENSSSCT00000019561.5 CHD5-202

Description

chromodomain helicase DNA binding protein 5 [Source:VGNC Symbol;Acc:VGNC:86632]

Location

About this transcript

This transcript has 42 exons, is annotated with 80 domains and features and is associated with 1607 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000019561.5	CHD5-202	9455	1950aa	ENSSSCP00000019043.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1NAG5 F1SSZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000042706.3	CHD5-201	7867	1929aa	ENSSSCP00000031438.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJ13 A0A4X1W8X3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 42, Coding exons: 41, Transcript length: 9,455 bps, Translation length: 1,950 residues

Version

ENSSSCT00000019561.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.