Transcript: ENSSSCT00000003469.5 LIG1-202

Description

DNA ligase 1 [Source:VGNC Symbol;Acc:VGNC:89720]

Location

About this transcript

This transcript has 29 exons, is annotated with 28 domains and features, is associated with 711 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000068819.2	LIG1-203	3290	916aa	ENSSSCP00000070663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0M7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000088405.2	LIG1-201	3613	829aa	ENSSSCP00000063056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFQ2	-
ENSSSCT00000087653.1	LIG1-204	3086	848aa	ENSSSCP00000062037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEE4	-
ENSSSCT00000003469.5	LIG1-202	2989	885aa	ENSSSCP00000003386.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RL99	-

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 2,989 bps, Translation length: 885 residues

Version

ENSSSCT00000003469.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 16.