Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000053050.3 PRDM1-201

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Description

PR/SET domain 1 [Source:VGNC Symbol;Acc:VGNC:91772]

Location

Primary_assembly 1: 72,324,407-72,335,466 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 40 domains and features and is associated with 341 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000004369.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000037769.3	PRDM1-202	4920	842aa	ENSSSCP00000057386.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLU1 A0A4X1VE26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000004830.4	PRDM1-204	5053	828aa	ENSSSCP00000004716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VA80 F1RYP9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000053050.3	PRDM1-201	4675	694aa	ENSSSCP00000049758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0W9 A0A4X1VA87	-
ENSSSCT00000038421.3	PRDM1-203	4135	785aa	ENSSSCP00000056637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BJT0 A0A4X1VDZ6	-

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Protein summary

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Protein domains for ENSSSCP00000049758.1

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