Primary_assembly X: 74,463,060-75,191,926 forward strand.
Sscrofa11.1:CM000830.5
This gene has 5 transcripts (splice variants), 197 orthologues and 32 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000081395.2 | - | 8814 | 1350aa | ENSSSCP00000069209.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1W3X8 A0A5G2QW78 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000089433.2 | - | 8784 | 1340aa | ENSSSCP00000070679.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1VYG8 A0A5G2R982 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000053308.3 | - | 6025 | 1018aa | ENSSSCP00000056727.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BJE2 A0A4X1W4A9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000023372.4 | - | 5600 | 1342aa | ENSSSCP00000027762.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1W322 I3LUG2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000063417.2 | - | 4241 | 1026aa | ENSSSCP00000057409.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BLB8 A0A4X1W5L0 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
