caspase 1, apoptosis-related cysteine peptidase [Source:NCBI gene (formerly Entrezgene);Acc:397319]
Primary_assembly 9: 35,186,420-35,200,328 reverse strand.
Sscrofa11.1:CM000820.5
This gene has 8 transcripts (splice variants), 451 orthologues and 14 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000079620.2 | CASP1-207 | 3973 | 362aa | ENSSSCP00000071205.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RAP6 | - |
| ENSSSCT00000076386.1 | CASP1-206 | 3116 | 406aa | ENSSSCP00000064928.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QK90 A0A8D0ZDD8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000081027.2 | CASP1-208 | 2519 | 428aa | ENSSSCP00000070977.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RHT4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000070445.1 | CASP1-204 | 2416 | 383aa | ENSSSCP00000065663.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1THX9 A0A5G2QM38 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000044416.3 | CASP1-202 | 2024 | 263aa | ENSSSCP00000037139.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZZS2 | - |
| ENSSSCT00000027757.3 | CASP1-201 | 1401 | 386aa | ENSSSCP00000023919.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0V6S2 I3LIL3 | - |
| ENSSSCT00000061467.3 | CASP1-203 | 1179 | 339aa | ENSSSCP00000055673.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BHQ8 | - |
| ENSSSCT00000074621.1 | CASP1-205 | 528 | 88aa | ENSSSCP00000061528.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1TM88 A0A5G2QHR2 | - |
