Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000027349

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Location

Primary_assembly 8: 3,833,317-3,929,059 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061952.3	-	1406	465aa	ENSSSCP00000042838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AG55 A0A4X1SMP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000090339.2	-	3791	413aa	ENSSSCP00000069985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SN39 A0A5G2R0T0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000025950.4	-	2235	415aa	ENSSSCP00000022372.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LE86	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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