Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGCL ENSSSCG00000026025

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Description

3-hydroxy-3-methylglutaryl-CoA lyase [Source:VGNC Symbol;Acc:VGNC:88904]

Location

Primary_assembly 6: 81,611,422-81,630,429 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000027923.4	HMGCL-202	1698	373aa	ENSSSCP00000023921.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LIL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000047993.3	HMGCL-201	1851	264aa	ENSSSCP00000052072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B7J0 A0A4X1VYM9	-
ENSSSCT00000101193.1	HMGCL-203	1716	325aa	ENSSSCP00000077374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGD5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000043447.3	HMGCL-205	1638	297aa	ENSSSCP00000054204.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BD01 A0A8D0R6Y0	-
ENSSSCT00000049113.2	HMGCL-204	1503	254aa	ENSSSCP00000045574.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANI6 A0A4X1VY82	-

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Summary

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