Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PHLDB1 ENSSSCG00000024578

.

Description

pleckstrin homology like domain family B member 1 [Source:VGNC Symbol;Acc:VGNC:91398]

Location

Primary_assembly 9: 45,902,155-45,949,415 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 3 transcripts (splice variants), 233 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000026664.4	PHLDB1-203	5656	1380aa	ENSSSCP00000023724.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LI25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000082627.2	PHLDB1-202	5772	1345aa	ENSSSCP00000073289.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAE0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000100861.1	PHLDB1-201	1443	247aa	ENSSSCP00000079300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0XK86 A0A8W4FJ96	-

.

Summary

.

.