Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: NOC2L ENSSSCG00000023973

.

Description

NOC2 like nucleolar associated transcriptional repressor [Source:VGNC Symbol;Acc:VGNC:90807]

Location

Primary_assembly 6: 63,307,695-63,335,201 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000028244.4	NOC2L-203	2927	749aa	ENSSSCP00000020664.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JLU9 I3L9F2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000038412.3	NOC2L-204	2862	749aa	ENSSSCP00000039650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A6S6 A0A8D1LSG2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000099124.1	NOC2L-202	2687	712aa	ENSSSCP00000081066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FR86	-
ENSSSCT00000024617.3	NOC2L-201	2329	713aa	ENSSSCP00000023786.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1BYG0 I3LI86	-

.

Summary

.

.