Primary_assembly Y: 40,189,521-40,196,290 reverse strand.
Sscrofa11.1:LT634572.1
This gene has 6 transcripts (splice variants), 209 orthologues and 12 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000022749.4 | - | 1397 | 327aa | ENSSSCP00000020905.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3LA39 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000104175.1 | - | 1179 | 392aa | ENSSSCP00000078332.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FG93 | - |
| ENSSSCT00000094398.1 | - | 1059 | 352aa | ENSSSCP00000079603.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FL16 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000105175.1 | - | 966 | 321aa | ENSSSCP00000078938.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FI87 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000093336.1 | - | 843 | 280aa | ENSSSCP00000081149.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FQ84 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000106393.1 | - | 714 | 237aa | ENSSSCP00000074890.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4F6R9 | - |
