Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBXN1 ENSSSCG00000023110

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Description

UBX domain protein 1 [Source:VGNC Symbol;Acc:VGNC:94674]

Location

Primary_assembly 2: 9,072,968-9,075,594 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants), 196 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000085586.2	UBXN1-201	1029	310aa	ENSSSCP00000063729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000062292.3	UBXN1-203	1281	269aa	ENSSSCP00000049596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZM3	-
ENSSSCT00000029345.3	UBXN1-204	1081	297aa	ENSSSCP00000027734.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LUD5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000066567.1	UBXN1-205	904	238aa	ENSSSCP00000074403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RBL1	-
ENSSSCT00000067501.2	UBXN1-202	828	242aa	ENSSSCP00000066548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNT0	-

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Summary

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