Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NT5C3A ENSSSCG00000022912

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Description

5'-nucleotidase, cytosolic IIIA [Source:VGNC Symbol;Acc:VGNC:98162]

Location

Primary_assembly 18: 40,441,171-40,483,376 forward strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 4 transcripts (splice variants), 215 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024461.4	NT5C3A-204	1968	331aa	ENSSSCP00000021768.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SQB0 I3LCJ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000052849.2	NT5C3A-202	4320	203aa	ENSSSCP00000045942.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APY8 A0A8D1B9Q8	-
ENSSSCT00000047860.2	NT5C3A-203	3452	295aa	ENSSSCP00000057945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPC7 A0A4X1SP24	-
ENSSSCT00000062594.2	NT5C3A-201	1786	286aa	ENSSSCP00000037611.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1I0 A0A8D1FDL2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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