Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPRIN2 ENSSSCG00000022611

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Description

caprin family member 2 [Source:VGNC Symbol;Acc:VGNC:86179]

Location

Primary_assembly 5: 43,044,266-43,087,748 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 6 transcripts (splice variants), 211 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000092577.1	CAPRIN2-205	3547	1066aa	ENSSSCP00000080466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FQ49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000097300.1	CAPRIN2-206	3851	949aa	ENSSSCP00000074727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F6G9	-
ENSSSCT00000025036.4	CAPRIN2-204	3622	903aa	ENSSSCP00000027172.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LSS9	-
ENSSSCT00000092444.1	CAPRIN2-202	3465	1034aa	ENSSSCP00000081200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VLQ8 A0A8W4FPA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000100729.1	CAPRIN2-203	3396	1009aa	ENSSSCP00000076766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LMB0	-
ENSSSCT00000098897.1	CAPRIN2-201	968	292aa	ENSSSCP00000078681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FGW9	-

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Summary

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