Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTNAP1 ENSSSCG00000017393

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Description

contactin associated protein 1 [Source:VGNC Symbol;Acc:VGNC:86849]

Location

Primary_assembly 12: 20,141,641-20,157,044 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 5 transcripts (splice variants), 122 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000070576.1	CNTNAP1-202	5927	1384aa	ENSSSCP00000062609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TZ75 A0A5G2QWQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000082323.1	CNTNAP1-203	5807	1344aa	ENSSSCP00000066575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPE9	-
ENSSSCT00000103743.1	CNTNAP1-204	5720	1315aa	ENSSSCP00000074864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F7V6	-
ENSSSCT00000073252.2	CNTNAP1-205	5717	1314aa	ENSSSCP00000069501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QX99 A0A8D0YVB9	-
ENSSSCT00000018933.4	CNTNAP1-201	5362	1350aa	ENSSSCP00000018428.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0Y329 F1S1F0	-

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Summary

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