lunapark, ER junction formation factor [Source:VGNC Symbol;Acc:VGNC:95970]
Primary_assembly 15: 81,721,644-81,805,680 reverse strand.
Sscrofa11.1:CM000826.5
This gene has 4 transcripts (splice variants) and 273 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000052609.2 | LNPK-202 | 2170 | 419aa | ENSSSCP00000040308.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A8V7 A0A8D1XLX7 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000025624.4 | LNPK-204 | 3700 | 387aa | ENSSSCP00000023030.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0RC79 I3LG37 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000089012.2 | LNPK-201 | 2038 | 369aa | ENSSSCP00000062852.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0XQ64 F1RZH8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000044418.1 | LNPK-203 | 2017 | 358aa | ENSSSCP00000053163.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B9F9 A0A8D0J6Y3 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
