Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHTF2 ENSSSCG00000015410

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Description

putative homeodomain transcription factor 2 [Source:VGNC Symbol;Acc:VGNC:91405]

Location

Primary_assembly 9: 102,221,326-102,348,696 reverse strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 6 transcripts (splice variants), 208 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000052957.3	PHTF2-203	4886	782aa	ENSSSCP00000031613.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJB2 A0A8D2CJN7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000078986.2	PHTF2-206	4867	751aa	ENSSSCP00000063820.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SFB9 A0A5G2QZY9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000016785.3	PHTF2-204	4702	715aa	ENSSSCP00000016337.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SEV7 F1SB87	-
ENSSSCT00000066663.2	PHTF2-205	4663	695aa	ENSSSCP00000069933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SEK5 A0A5G2QYI2	-
ENSSSCT00000046348.3	PHTF2-202	4251	703aa	ENSSSCP00000053508.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBL6 A0A4X1SFD2	-
ENSSSCT00000042272.3	PHTF2-201	4083	678aa	ENSSSCP00000035673.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZW03	-

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Summary

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