Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NLRP6 ENSSSCG00000014561

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Description

NLR family pyrin domain containing 6 [Source:VGNC Symbol;Acc:VGNC:90786]

Location

Primary_assembly 2: 90,027-97,439 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 65 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000067488.1	NLRP6-202	3908	891aa	ENSSSCP00000072858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RKW8 A0A8D1HWT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000048456.2	NLRP6-203	3884	880aa	ENSSSCP00000051669.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B6H0 A0A8D1FGG8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000040835.2	NLRP6-204	3713	823aa	ENSSSCP00000042009.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ADC1 A0A8D1HZ07	-
ENSSSCT00000015911.5	NLRP6-201	3252	766aa	ENSSSCP00000015491.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1X7Y7 F1RGC8	-

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Summary

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