Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM36 ENSSSCG00000014214

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Description

tripartite motif containing 36 [Source:VGNC Symbol;Acc:VGNC:94409]

Location

Primary_assembly 2: 119,306,665-119,352,465 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues and 75 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039019.2	TRIM36-204	4166	729aa	ENSSSCP00000040985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AB27 A0A8D0RXI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000032987.3	TRIM36-202	4140	727aa	ENSSSCP00000029926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1FZK3 K7GPW0	-
ENSSSCT00000015532.4	TRIM36-203	4131	724aa	ENSSSCP00000015120.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1L2H5 F1RLE9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000033618.4	TRIM36-201	2580	684aa	ENSSSCP00000031301.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZIC5 A0A8D0RWP3	-

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Summary

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