Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
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External references
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ID History
- Gene history

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Gene: RAB3GAP2 ENSSSCG00000010824

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Description

RAB3 GTPase activating non-catalytic protein subunit 2 [Source:VGNC Symbol;Acc:VGNC:95833]

Location

Primary_assembly 10: 9,734,768-9,828,525 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 4 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050571.3	RAB3GAP2-202	7109	1453aa	ENSSSCP00000053302.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BB18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000011842.5	RAB3GAP2-203	7097	1449aa	ENSSSCP00000011539.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S9J9	-
ENSSSCT00000039520.3	RAB3GAP2-204	6467	1239aa	ENSSSCP00000057641.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BNI6 A0A4X1TKT0	-
ENSSSCT00000058354.3	RAB3GAP2-201	6341	1426aa	ENSSSCP00000050944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B4A4 A0A4X1TMX1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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