Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Gene: FANK1 ENSSSCG00000010745

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Description

fibronectin type III and ankyrin repeat domains 1 [Source:VGNC Symbol;Acc:VGNC:88009]

Location

Primary_assembly 14: 135,197,450-135,302,516 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 2 transcripts (splice variants) and 142 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000075844.2	FANK1-202	4635	346aa	ENSSSCP00000074374.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B2TT35 A0A4X1VBL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000080635.2	FANK1-201	4563	346aa	ENSSSCP00000062785.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QX67 A0A8D1GTS7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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