Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLK ENSSSCG00000010606

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Description

STE20 like kinase [Source:VGNC Symbol;Acc:VGNC:98328]

Location

Primary_assembly 14: 114,899,147-114,955,070 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants), 271 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000061849.2	SLK-203	5142	1237aa	ENSSSCP00000045946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APG0 A0A4X1TJZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000011602.5	SLK-202	5089	1206aa	ENSSSCP00000011300.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0TAF0 F1S5P2	-
ENSSSCT00000075480.1	SLK-201	3978	1209aa	ENSSSCP00000073109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R9X1 A0A8D2BZ72	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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