Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
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ID History
- Gene history

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Gene: RBP3 ENSSSCG00000010374

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Description

retinol binding protein 3 [Source:VGNC Symbol;Acc:VGNC:109482]

Location

Primary_assembly 14: 88,490,013-88,504,510 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants) and 236 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011356.2	RBP3-202	3855	1284aa	ENSSSCP00000011062.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SEL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000094304.1	RBP3-201	6464	1031aa	ENSSSCP00000075897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FC75	-
ENSSSCT00000054405.1	RBP3-203	3810	1269aa	ENSSSCP00000040300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A908	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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