Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PITPNB ENSSSCG00000009967

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Description

phosphatidylinositol transfer protein beta [Source:VGNC Symbol;Acc:VGNC:104026]

Location

Primary_assembly 14: 45,185,451-45,250,084 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 5 transcripts (splice variants), 281 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024426.4	PITPNB-201	843	280aa	ENSSSCP00000023188.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LGJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000085883.2	PITPNB-203	3069	269aa	ENSSSCP00000062639.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWS9 A0A8D0WLR4	-
ENSSSCT00000084613.2	PITPNB-204	2886	271aa	ENSSSCP00000066232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QMX1 A0A8D1HPP2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000086105.1	PITPNB-205	2814	272aa	ENSSSCP00000066866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SH67 A0A5G2QY42	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000010923.4	PITPNB-202	804	267aa	ENSSSCP00000010638.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1XJU9 F1RG66	-

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Summary

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