Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DDX60 ENSSSCG00000009720

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Description

DExD/H-box helicase 60 [Source:VGNC Symbol;Acc:VGNC:87234]

Location

Primary_assembly 14: 21,083,350-21,163,561 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 9 transcripts (splice variants), 115 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000071910.1	DDX60-203	6256	1704aa	ENSSSCP00000066827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UW90 A0A5G2QRV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000065233.3	DDX60-209	6122	1684aa	ENSSSCP00000041909.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AD25	-
ENSSSCT00000047342.3	DDX60-201	6065	1628aa	ENSSSCP00000041274.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABK4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000041121.2	DDX60-206	5846	1664aa	ENSSSCP00000055145.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BFN9	-
ENSSSCT00000039842.1	DDX60-204	5843	1665aa	ENSSSCP00000042601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AEZ8 A0A4X1V160	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000061116.1	DDX60-207	5831	1654aa	ENSSSCP00000054579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BEN8 A0A4X1V0F8	-
ENSSSCT00000069544.1	DDX60-208	5828	1651aa	ENSSSCP00000063539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QGU8	-
ENSSSCT00000049404.1	DDX60-205	5807	1653aa	ENSSSCP00000036145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWX9 A0A4X1UZZ8	-
ENSSSCT00000082672.1	DDX60-202	5732	1637aa	ENSSSCP00000066341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6W4	-

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Summary

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