NIMA related kinase 1 [Source:VGNC Symbol;Acc:VGNC:98150]
Primary_assembly 14: 20,144,659-20,332,245 forward strand.
Sscrofa11.1:CM000825.5
This gene has 7 transcripts (splice variants), 201 orthologues and 8 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000053967.3 | NEK1-204 | 5143 | 1236aa | ENSSSCP00000048241.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AWJ2 A0A8D0RJ38 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000104349.1 | NEK1-205 | 5107 | 1224aa | ENSSSCP00000078149.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1LUB4 A0A8W4FFE4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000070567.2 | NEK1-206 | 5023 | 1196aa | ENSSSCP00000072354.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A480QSE5 A0A8D0ULS8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000042806.3 | NEK1-203 | 4957 | 1176aa | ENSSSCP00000043105.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AGX2 A0A8D0RC43 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000037030.3 | NEK1-207 | 4798 | 1121aa | ENSSSCP00000036846.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZYY1 A0A8D1HJE2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000010651.4 | NEK1-202 | 3717 | 1106aa | ENSSSCP00000010374.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1KY74 F1RIY0 | - |
| ENSSSCT00000010650.5 | NEK1-201 | 3625 | 1136aa | ENSSSCP00000010373.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0RAN6 F1RIY1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
