Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AGBL5 ENSSSCG00000008558

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Description

AGBL carboxypeptidase 5 [Source:VGNC Symbol;Acc:VGNC:85177]

Location

Primary_assembly 3: 112,047,290-112,066,977 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000056994.3	AGBL5-204	3193	886aa	ENSSSCP00000049492.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZA4 A0A8D1D440	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000009363.5	AGBL5-203	3229	802aa	ENSSSCP00000009123.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1Q1S1 F1SDQ4	-
ENSSSCT00000045676.2	AGBL5-202	2985	829aa	ENSSSCP00000048865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AYA5	-
ENSSSCT00000054355.3	AGBL5-201	2846	717aa	ENSSSCP00000046799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ASG5 A0A8D1G9Z7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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