Primary_assembly 3: 8,090,852-8,101,041 reverse strand.
Sscrofa11.1:CM000814.5
This gene has 3 transcripts (splice variants), 129 orthologues and 2 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000104927.1 | - | 1362 | 271aa | ENSSSCP00000080210.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4FPH4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000054900.3 | - | 1197 | 254aa | ENSSSCP00000048804.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AY41 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000096980.1 | - | 1175 | 283aa | ENSSSCP00000075695.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4F8Q1 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
