Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCSK6 ENSSSCG00000005785

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Description

proprotein convertase subtilisin/kexin type 6 [Source:VGNC Symbol;Acc:VGNC:103148]

Location

Primary_assembly 1: 145,508,534-145,695,666 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006361.5	PCSK6-203	3037	965aa	ENSSSCP00000006199.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U6K9 F1RZ92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000044351.3	PCSK6-204	2998	952aa	ENSSSCP00000041047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AAR7 A0A4X1U9F2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000082193.2	PCSK6-202	2699	826aa	ENSSSCP00000064395.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQQ5	-
ENSSSCT00000088878.2	PCSK6-201	1999	620aa	ENSSSCP00000062443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U4G6 A0A5G2QE53	-

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Summary

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