Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN3 ENSSSCG00000004728

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Description

calpain 3 [Source:VGNC Symbol;Acc:VGNC:103042]

Location

Primary_assembly 1: 128,960,118-129,013,546 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 7 transcripts (splice variants), 287 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000066596.1	CAPN3-205	3595	830aa	ENSSSCP00000073818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R959 A0A8D1CRG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000070490.1	CAPN3-202	3553	816aa	ENSSSCP00000065787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QUZ9 A0A8D0ZA04	-
ENSSSCT00000090081.2	CAPN3-204	3402	816aa	ENSSSCP00000066545.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V0D1 A0A5G2QPB9	-
ENSSSCT00000005221.5	CAPN3-207	3273	773aa	ENSSSCP00000005095.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SI23	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000037973.3	CAPN3-203	3100	729aa	ENSSSCP00000059453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BSN0 A0A8D0RVE7	-
ENSSSCT00000084124.1	CAPN3-206	2935	699aa	ENSSSCP00000063865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R032	-
ENSSSCT00000005224.5	CAPN3-201	1153	202aa	ENSSSCP00000005098.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SI20	-

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Summary

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